SLAS Premier Members

 View Only
  • 1.  Looking for assistance in Flow Cytometry Data analysis

    Posted 04-22-2021 02:20 PM
    Hey Everyone in the SLAS community,
    We are looking for some assistance in analyzing some flow cytometry results from some of our current experiments. We basically need assistance in validating our flow cytometry gating strategy to identify target cell populations. Please message me if you are available and we can share the FCS files.


    ------------------------------
    Coleman Murray
    Chief Operating Officer
    Ferrologix Inc
    ------------------------------


  • 2.  RE: Looking for assistance in Flow Cytometry Data analysis

    Posted 04-27-2021 06:52 PM
    Edited by Timothy Fallon 04-27-2021 06:53 PM
    Hey there Coleman, don't know if this is what you're looking for exactly, but for my own FCS analyses I've found it convinient to use the fcsparser library https://github.com/eyurtsev/fcsparser , within Jupyter & matplotlib to visualize the gates etc (but I also didn't have access to FloJo or other "standard" flow cytometry software)


    ------------------------------
    Timothy Fallon
    Postdoctoral Researcher
    Scripps Institution of Oceanography / UCSD
    La Jolla CA
    ------------------------------



  • 3.  RE: Looking for assistance in Flow Cytometry Data analysis

    Posted 04-28-2021 02:41 PM
    Thanks Tim,
    This is a good resource. We currently have FloJo so we can visualize the FCS files but we need some assistance in setting our gates properly.

    Best,
    Coleman

    ------------------------------
    Coleman Murray
    Chief Operating Officer
    Ferrologix Inc
    ------------------------------